Data Loading and Exchange

Functions for loading data or converting to and from other spectral R packages

read_ftir()

Read FTIR file

read_ftir_directory()

Read FTIR file

chemospec_to_plotftir()

`ChemoSec` to `PlotFTIR` conversions

plotftir_to_chemospec()

Convert `PlotFTIR` data to `ChemoSpec` format

plotftir_to_ir()

Convert `PlotFTIR` data to `ir`

ir_to_plotftir()

Convert `ir` to `PlotFTIR` data format

check_ftir_data()

Check FTIR Data

print(<PlotFTIR_data>)

Print PlotFTIR Data

biodiesel

FTIR Bio-diesel data

sample_spectra

FTIR example data

Spectral Mathematical Changes

Functions for changing or modifying spectra numerically

add_scalar_value() subtract_scalar_value()

Add or Subtract Scalar Value

average_spectra()

Average FTIR Spectra

absorbance_to_transmittance() transmittance_to_absorbance()

Convert Between Absorbance and Transmittance

normalize_spectra()

Normalize FTIR spectra

recalculate_baseline()

Recalculate Baseline

Plotting and Graphical Changes

Functions for plotting specta and annotating or manipulating plots

plot_ftir()

Plot FTIR Spectra Overlaid

plot_ftir_stacked()

Plot FTIR in stacked format

add_band()

Add Band

add_wavenumber_marker()

Add a Marker at a Wavenumber

compress_low_energy()

Compress Low-Energy Region

highlight_sample()

Highlight Sample Spectra

move_plot_legend()

Move Plot Legend

get_plot_sample_ids()

Get Plot Sample IDs

rename_plot_sample_ids()

Rename Sample IDs in Plot

save_plot()

Save FTIR Plot

zoom_in_on_range()

Zoom in on a spectral range